Bradi5g17970.1

Description : VASCULAR-RELATED NAC-DOMAIN 6

Gene families : OG_01_0016169 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016169_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi5g17970.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_239

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036875	Znf_CCHC_sf	SUPERFAMILY	65	114
IPR001878	Znf_CCHC	ProSiteProfiles	150	165
IPR001878	Znf_CCHC	Pfam	150	165
IPR001878	Znf_CCHC	Pfam	123	138
IPR036875	Znf_CCHC_sf	SUPERFAMILY	121	167
IPR025836	Zn_knuckle_CX2CX4HX4C	Pfam	96	112
IPR025836	Zn_knuckle_CX2CX4HX4C	Pfam	176	191
IPR001878	Znf_CCHC	SMART	97	113
IPR001878	Znf_CCHC	SMART	72	88
IPR001878	Znf_CCHC	SMART	176	192
IPR001878	Znf_CCHC	SMART	122	138
IPR001878	Znf_CCHC	SMART	149	165
IPR001878	Znf_CCHC	ProSiteProfiles	123	138

No CAZYmes available for this sequence

External Links

No external refs found!