Bradi5g26070.1

No description available

Gene families : OG_01_0016683 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016683_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi5g26070.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_148

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	376	410
IPR002885	Pentatricopeptide_rpt	Pfam	277	307
IPR002885	Pentatricopeptide_rpt	Pfam	72	102
IPR002885	Pentatricopeptide_rpt	Pfam	451	474
IPR002885	Pentatricopeptide_rpt	Pfam	350	375
IPR002885	Pentatricopeptide_rpt	Pfam	148	169
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	70	104
IPR045215	PPR_prot_At1g15510	PANTHER	3	555
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	343	516
IPR002885	Pentatricopeptide_rpt	TIGRFAM	451	474
IPR002885	Pentatricopeptide_rpt	TIGRFAM	72	105
IPR002885	Pentatricopeptide_rpt	TIGRFAM	277	310
IPR002885	Pentatricopeptide_rpt	TIGRFAM	378	411
IPR011990	TPR-like_helical_dom_sf	Gene3D	124	225
IPR002885	Pentatricopeptide_rpt	Pfam	377	422
IPR002885	Pentatricopeptide_rpt	Pfam	174	220
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	275	309
IPR011990	TPR-like_helical_dom_sf	Gene3D	3	123
IPR011990	TPR-like_helical_dom_sf	Gene3D	393	558
IPR011990	TPR-like_helical_dom_sf	Gene3D	226	375

No CAZYmes available for this sequence

External Links

No external refs found!