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  5. Sevir.1G099100.1

Sevir.1G099100.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014838 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014838_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G099100.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G099100.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_27


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 192 301
IPR011990 TPR-like_helical_dom_sf Gene3D 305 401
IPR002885 Pentatricopeptide_rpt TIGRFAM 224 252
IPR002885 Pentatricopeptide_rpt TIGRFAM 101 129
IPR002885 Pentatricopeptide_rpt TIGRFAM 7 37
IPR002885 Pentatricopeptide_rpt TIGRFAM 69 94
IPR002885 Pentatricopeptide_rpt TIGRFAM 194 223
IPR002885 Pentatricopeptide_rpt TIGRFAM 352 385
IPR002885 Pentatricopeptide_rpt TIGRFAM 131 160
IPR002885 Pentatricopeptide_rpt TIGRFAM 38 67
IPR002885 Pentatricopeptide_rpt TIGRFAM 162 192
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 222 256
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 67 97
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 5 39
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 98 132
IPR002885 Pentatricopeptide_rpt Pfam 194 222
IPR002885 Pentatricopeptide_rpt Pfam 324 349
IPR002885 Pentatricopeptide_rpt Pfam 38 65
IPR002885 Pentatricopeptide_rpt Pfam 224 253
IPR002885 Pentatricopeptide_rpt Pfam 7 37
IPR002885 Pentatricopeptide_rpt Pfam 101 129
IPR002885 Pentatricopeptide_rpt Pfam 69 95
IPR011990 TPR-like_helical_dom_sf Gene3D 2 95
IPR011990 TPR-like_helical_dom_sf Gene3D 96 191
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 160 194
IPR011990 TPR-like_helical_dom_sf Gene3D 402 543
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 350 384
IPR002885 Pentatricopeptide_rpt Pfam 350 397
IPR002885 Pentatricopeptide_rpt Pfam 159 192

No CAZYmes available for this sequence

No external refs found!