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  5. Sevir.3G172900.1

Sevir.3G172900.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0001978 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001978_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G172900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G172900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_62


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 258 292
IPR017422 WDR55 PIRSF 1 357
IPR001680 WD40_rpt Pfam 256 290
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 5 292
IPR019775 WD40_repeat_CS ProSitePatterns 277 291
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 3 179
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 180 311
IPR001680 WD40_rpt SMART 82 121
IPR001680 WD40_rpt SMART 168 205
IPR001680 WD40_rpt SMART 124 163
IPR001680 WD40_rpt SMART 40 79
IPR001680 WD40_rpt SMART 209 247
IPR001680 WD40_rpt SMART 250 290

No CAZYmes available for this sequence

No external refs found!