Description : trehalose-6-phosphate synthase
Gene families : OG_01_0004370 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004370_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G180900.1 | |
Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G180900.1 | |
Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127 | |
Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_108 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | ISM | GOs from InterProScan |
MF | GO:0003825 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | ISM | GOs from InterProScan |
BP | GO:0005992 | trehalose biosynthetic process | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR012766 | Trehalose_OtsA | TIGRFAM | 127 | 592 |
IPR036412 | HAD-like_sf | SUPERFAMILY | 624 | 953 |
IPR001830 | Glyco_trans_20 | CDD | 127 | 592 |
IPR001830 | Glyco_trans_20 | PANTHER | 114 | 953 |
IPR023214 | HAD_sf | Gene3D | 652 | 812 |
IPR003337 | Trehalose_PPase | Pfam | 651 | 858 |
IPR001830 | Glyco_trans_20 | Pfam | 127 | 592 |
HMM Family | HMM Length | Query Length | e-Value | Query Start | Query End |
---|---|---|---|---|---|
GT20 | 475 | 973 | 1.9e-199 | 124 | 592 |
No external refs found! |