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  5. Sevir.3G190500.1

Sevir.3G190500.1


Description : calreticulin 3


Gene families : OG_01_0006842 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006842_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G190500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G190500.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_125


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005783 endoplasmic reticulum ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009033 Calreticulin/calnexin_P_dom_sf SUPERFAMILY 203 318
IPR001580 Calret/calnex Pfam 262 335
IPR001580 Calret/calnex Pfam 25 260
IPR018124 Calret/calnex_CS ProSitePatterns 100 115
IPR013320 ConA-like_dom_sf SUPERFAMILY 17 219
IPR001580 Calret/calnex PRINTS 245 267
IPR001580 Calret/calnex PRINTS 102 120
IPR001580 Calret/calnex PRINTS 283 302
IPR001580 Calret/calnex PRINTS 217 230
IPR001580 Calret/calnex PRINTS 128 144
IPR001580 Calret/calnex PRINTS 316 336
IPR009169 Calreticulin PIRSF 2 413
IPR009033 Calreticulin/calnexin_P_dom_sf Gene3D 207 308
IPR001580 Calret/calnex PANTHER 5 415

No CAZYmes available for this sequence

No external refs found!