1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.3G239000.1

Sevir.3G239000.1


Description : ankyrin repeat family protein


Gene families : OG_01_0003174 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003174_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G239000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G239000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_111
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_33


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 52 379
IPR036770 Ankyrin_rpt-contain_sf Gene3D 12 121
IPR002110 Ankyrin_rpt ProSiteProfiles 54 74
IPR002110 Ankyrin_rpt Pfam 134 211
IPR002110 Ankyrin_rpt Pfam 54 111
IPR002110 Ankyrin_rpt Pfam 247 319
IPR036770 Ankyrin_rpt-contain_sf Gene3D 122 218
IPR002110 Ankyrin_rpt ProSiteProfiles 337 370
IPR002110 Ankyrin_rpt SMART 301 330
IPR002110 Ankyrin_rpt SMART 88 117
IPR002110 Ankyrin_rpt SMART 129 158
IPR002110 Ankyrin_rpt SMART 54 83
IPR002110 Ankyrin_rpt SMART 337 367
IPR002110 Ankyrin_rpt SMART 163 193
IPR002110 Ankyrin_rpt SMART 267 296
IPR002110 Ankyrin_rpt SMART 201 262
IPR002110 Ankyrin_rpt ProSiteProfiles 163 189
IPR026961 PGG_dom Pfam 454 539
IPR036770 Ankyrin_rpt-contain_sf Gene3D 219 386

No CAZYmes available for this sequence

No external refs found!