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  5. Sevir.3G255800.1

Sevir.3G255800.1


Description : Aldolase-type TIM barrel family protein


Gene families : OG_01_0003352 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003352_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G255800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G255800.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7


Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process ISM GOs from InterProScan
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006062 His_biosynth Pfam 49 282
IPR013785 Aldolase_TIM Gene3D 45 302
IPR044524 Isoase_HisA-like PANTHER 1 304
IPR011858 His6-like_euk TIGRFAM 46 299
IPR011060 RibuloseP-bd_barrel SUPERFAMILY 47 295

No CAZYmes available for this sequence

No external refs found!