Sevir.3G284500.1

Description : E3 ubiquitin ligase, putative

Gene families : OG_01_0004372 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004372_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G284500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G284500.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_118
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_291

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
CC	GO:0000152	nuclear ubiquitin ligase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005680	anaphase-promoting complex	ISM	GOs from InterProScan
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041221	APC1_C	Pfam	1603	1762
IPR011989	ARM-like	Gene3D	1271	1435
IPR024990	Apc1	PANTHER	6	1807
IPR024990	Apc1	Pfam	112	221
IPR011989	ARM-like	Gene3D	951	1223

No CAZYmes available for this sequence

External Links

No external refs found!