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  5. Sevir.3G296300.1

Sevir.3G296300.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001826 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001826_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G296300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G296300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_23
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_130


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0048188 Set1C/COMPASS complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 24 262
IPR001680 WD40_rpt ProSiteProfiles 267 297
IPR001680 WD40_rpt ProSiteProfiles 38 80
IPR001680 WD40_rpt SMART 204 243
IPR001680 WD40_rpt SMART 246 288
IPR001680 WD40_rpt SMART 119 158
IPR001680 WD40_rpt SMART 31 71
IPR001680 WD40_rpt ProSiteProfiles 126 158
IPR001680 WD40_rpt Pfam 123 158
IPR001680 WD40_rpt Pfam 256 288
IPR019775 WD40_repeat_CS ProSitePatterns 275 289
IPR020472 G-protein_beta_WD-40_rep PRINTS 275 289
IPR020472 G-protein_beta_WD-40_rep PRINTS 58 72
IPR020472 G-protein_beta_WD-40_rep PRINTS 145 159
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 39 328
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 263 338
IPR037867 Swd2/WDR82 PANTHER 15 339

No CAZYmes available for this sequence

No external refs found!