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Description : PLAT/LH2 domain-containing lipoxygenase family protein
Gene families : OG_01_0008492 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008492_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G304200.2 | |
| Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G304200.2 | |
| Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182 | |
| Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_65 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001024 | PLAT/LH2_dom | Pfam | 77 | 146 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 255 | 348 |
| IPR013819 | LipOase_C | PRINTS | 500 | 517 |
| IPR013819 | LipOase_C | PRINTS | 482 | 499 |
| IPR013819 | LipOase_C | PRINTS | 520 | 540 |
| IPR013819 | LipOase_C | ProSiteProfiles | 150 | 849 |
| IPR020834 | LipOase_CS | ProSitePatterns | 527 | 537 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 23 | 147 |
| IPR013819 | LipOase_C | Pfam | 160 | 826 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 152 | 849 |
| IPR001024 | PLAT/LH2_dom | SMART | 19 | 148 |
| IPR001246 | LipOase_plant | PRINTS | 335 | 351 |
| IPR001246 | LipOase_plant | PRINTS | 756 | 770 |
| IPR001246 | LipOase_plant | PRINTS | 214 | 233 |
| IPR001246 | LipOase_plant | PRINTS | 182 | 198 |
| IPR001246 | LipOase_plant | PRINTS | 143 | 164 |
| IPR001246 | LipOase_plant | PRINTS | 436 | 460 |
| IPR001246 | LipOase_plant | PRINTS | 117 | 135 |
| IPR000907 | LipOase | PANTHER | 69 | 846 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 35 | 151 |
No CAZYmes available for this sequence
| No external refs found! |