1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.3G319200.1

Sevir.3G319200.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008494 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008494_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G319200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G319200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_22
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_72


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt Pfam 92 132
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 36 157
IPR019775 WD40_repeat_CS ProSitePatterns 119 133
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 161 407
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 60 379
IPR001680 WD40_rpt SMART 331 380
IPR001680 WD40_rpt SMART 135 175
IPR001680 WD40_rpt SMART 178 219
IPR001680 WD40_rpt SMART 91 132
IPR001680 WD40_rpt ProSiteProfiles 98 141
IPR039328 WDR89 PANTHER 45 411

No CAZYmes available for this sequence

No external refs found!