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  5. Sevir.3G322400.1

Sevir.3G322400.1


Description : chloride channel A


Gene families : OG_01_0010277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010277_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G322400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G322400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_100
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_66


Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISM GOs from InterProScan
BP GO:0006821 chloride transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014743 Cl-channel_core SUPERFAMILY 84 600
IPR001807 Cl-channel_volt-gated PRINTS 529 545
IPR001807 Cl-channel_volt-gated PRINTS 206 225
IPR001807 Cl-channel_volt-gated PRINTS 497 517
IPR001807 Cl-channel_volt-gated PRINTS 175 192
IPR001807 Cl-channel_volt-gated PRINTS 547 566
IPR001807 Cl-channel_volt-gated PRINTS 270 289
IPR001807 Cl-channel_volt-gated PRINTS 585 599
IPR002251 Cl_channel_pln PRINTS 323 330
IPR002251 Cl_channel_pln PRINTS 80 88
IPR002251 Cl_channel_pln PRINTS 449 465
IPR002251 Cl_channel_pln PRINTS 291 299
IPR002251 Cl_channel_pln PRINTS 305 315
IPR001807 Cl-channel_volt-gated Pfam 163 578

No CAZYmes available for this sequence

No external refs found!