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  5. Sevir.1G116900.2

Sevir.1G116900.2


Description : transcription factor IIIA


Gene families : OG_01_0000541 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000541_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G116900.2
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G116900.2
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_120
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_67


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type ProSiteProfiles 127 157
IPR013087 Znf_C2H2_type ProSitePatterns 129 152
IPR036236 Znf_C2H2_sf SUPERFAMILY 108 157
IPR013087 Znf_C2H2_type ProSitePatterns 100 122
IPR013087 Znf_C2H2_type ProSitePatterns 287 311
IPR036236 Znf_C2H2_sf SUPERFAMILY 82 124
IPR013087 Znf_C2H2_type ProSiteProfiles 254 284
IPR013087 Znf_C2H2_type ProSiteProfiles 98 127
IPR013087 Znf_C2H2_type ProSiteProfiles 70 97
IPR013087 Znf_C2H2_type ProSitePatterns 166 188
IPR013087 Znf_C2H2_type ProSitePatterns 72 92
IPR036236 Znf_C2H2_sf SUPERFAMILY 239 296
IPR013087 Znf_C2H2_type ProSitePatterns 256 279
IPR013087 Znf_C2H2_type ProSiteProfiles 164 188
IPR013087 Znf_C2H2_type SMART 70 92
IPR013087 Znf_C2H2_type SMART 164 188
IPR013087 Znf_C2H2_type SMART 224 245
IPR013087 Znf_C2H2_type SMART 98 122
IPR013087 Znf_C2H2_type SMART 254 279
IPR013087 Znf_C2H2_type SMART 196 221
IPR013087 Znf_C2H2_type SMART 127 152
IPR013087 Znf_C2H2_type SMART 285 311
IPR013087 Znf_C2H2_type SMART 24 46
IPR013087 Znf_C2H2_type ProSitePatterns 198 221
IPR013087 Znf_C2H2_type ProSiteProfiles 285 311
IPR013087 Znf_C2H2_type Pfam 70 92
IPR013087 Znf_C2H2_type Pfam 255 279
IPR013087 Znf_C2H2_type Pfam 98 122
IPR013087 Znf_C2H2_type Pfam 164 188

No CAZYmes available for this sequence

No external refs found!