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  5. Sevir.3G363400.1

Sevir.3G363400.1


Description : Histone superfamily protein


Gene families : OG_01_0001116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001116_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G363400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G363400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_3


Type GO Term Name Evidence Source
CC GO:0000786 nucleosome ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0046982 protein heterodimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002119 Histone_H2A PANTHER 3 134
IPR007125 Histone_H2A/H2B/H3 Pfam 12 89
IPR032454 Histone_H2A_C Pfam 92 126
IPR002119 Histone_H2A PRINTS 43 58
IPR002119 Histone_H2A PRINTS 14 36
IPR002119 Histone_H2A PRINTS 58 71
IPR002119 Histone_H2A PRINTS 72 86
IPR002119 Histone_H2A PRINTS 100 118
IPR032458 Histone_H2A_CS ProSitePatterns 22 28
IPR002119 Histone_H2A CDD 8 120
IPR002119 Histone_H2A SMART 3 123
IPR009072 Histone-fold SUPERFAMILY 17 120
IPR009072 Histone-fold Gene3D 1 128

No CAZYmes available for this sequence

No external refs found!