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  5. Sevir.3G395200.1

Sevir.3G395200.1


Description : ankyrin repeat family protein


Gene families : OG_01_0000710 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000710_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G395200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt SMART 240 269
IPR002110 Ankyrin_rpt SMART 174 203
IPR002110 Ankyrin_rpt SMART 76 105
IPR002110 Ankyrin_rpt SMART 141 170
IPR002110 Ankyrin_rpt SMART 109 138
IPR002110 Ankyrin_rpt SMART 42 72
IPR002110 Ankyrin_rpt SMART 207 236
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 299 410
IPR011990 TPR-like_helical_dom_sf Gene3D 302 411
IPR019734 TPR_repeat ProSiteProfiles 367 400
IPR002110 Ankyrin_rpt ProSiteProfiles 174 206
IPR002110 Ankyrin_rpt ProSiteProfiles 141 173
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 16 263
IPR002110 Ankyrin_rpt ProSiteProfiles 109 141
IPR036770 Ankyrin_rpt-contain_sf Gene3D 142 301
IPR019734 TPR_repeat SMART 333 366
IPR019734 TPR_repeat SMART 367 400
IPR019734 TPR_repeat SMART 299 332
IPR002110 Ankyrin_rpt ProSiteProfiles 76 108
IPR002110 Ankyrin_rpt PRINTS 110 125
IPR002110 Ankyrin_rpt PRINTS 157 171
IPR001440 TPR_1 Pfam 368 398
IPR002110 Ankyrin_rpt ProSiteProfiles 207 239
IPR036770 Ankyrin_rpt-contain_sf Gene3D 2 111
IPR002110 Ankyrin_rpt ProSiteProfiles 42 64
IPR036770 Ankyrin_rpt-contain_sf Gene3D 112 141
IPR002110 Ankyrin_rpt Pfam 179 263
IPR002110 Ankyrin_rpt Pfam 82 170
IPR002110 Ankyrin_rpt Pfam 16 72

No CAZYmes available for this sequence

No external refs found!