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  5. Sevir.3G401100.1

Sevir.3G401100.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0007837 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007837_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G401100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G401100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_105


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt SMART 200 238
IPR001680 WD40_rpt SMART 265 304
IPR001680 WD40_rpt SMART 465 506
IPR001680 WD40_rpt SMART 37 88
IPR001680 WD40_rpt SMART 523 559
IPR001680 WD40_rpt SMART 562 603
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 144 505
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 454 673
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 426 730
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 140 425
IPR011044 Quino_amine_DH_bsu SUPERFAMILY 11 109
IPR001680 WD40_rpt Pfam 273 303
IPR001680 WD40_rpt ProSiteProfiles 206 237
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 12 117
IPR001680 WD40_rpt ProSiteProfiles 272 313

No CAZYmes available for this sequence

No external refs found!