Sevir.3G413200.1

Description : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Gene families : OG_01_0000050 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000050_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G413200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G413200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003700	DNA-binding transcription factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008289	lipid binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001356	Homeobox_dom	SMART	19	85
IPR002913	START_lipid-bd_dom	ProSiteProfiles	162	362
IPR023393	START-like_dom_sf	Gene3D	204	388
IPR013978	MEKHLA	Pfam	710	852
IPR002913	START_lipid-bd_dom	SMART	171	381
IPR001356	Homeobox_dom	CDD	22	82
IPR001356	Homeobox_dom	Pfam	23	80
IPR001356	Homeobox_dom	ProSiteProfiles	17	81
IPR044830	HD-Zip_III	PANTHER	1	853
IPR009057	Homeobox-like_sf	SUPERFAMILY	21	84
IPR002913	START_lipid-bd_dom	Pfam	172	379

No CAZYmes available for this sequence

External Links

No external refs found!