1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.3G417500.2

Sevir.3G417500.2


Description : osmotin 34


Gene families : OG_01_0000679 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000679_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G417500.2
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G417500.2
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_30
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_19


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin PRINTS 67 76
IPR001938 Thaumatin PRINTS 47 59
IPR001938 Thaumatin PRINTS 101 130
IPR001938 Thaumatin PRINTS 138 154
IPR001938 Thaumatin PRINTS 187 196
IPR001938 Thaumatin PRINTS 89 100
IPR037176 Osmotin/thaumatin-like_sf Gene3D 168 197
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 45 197
IPR001938 Thaumatin SMART 48 197
IPR037176 Osmotin/thaumatin-like_sf Gene3D 45 167
IPR001938 Thaumatin Pfam 52 158
IPR001938 Thaumatin ProSiteProfiles 45 197
IPR001938 Thaumatin PANTHER 26 197
IPR001938 Thaumatin PIRSF 9 169
IPR001938 Thaumatin PIRSF 163 197
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 198 4.1e-39 52 169
No external refs found!