Sevir.3G419100.1

Description : translation initiation factor 3 (IF-3) family protein

Gene families : OG_01_0010423 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010423_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G419100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G419100.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_78

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001288	Translation_initiation_fac_3	TIGRFAM	74	228
IPR001288	Translation_initiation_fac_3	PANTHER	1	450
IPR036788	T_IF-3_C_sf	SUPERFAMILY	154	236
IPR036787	T_IF-3_N_sf	Gene3D	65	140
IPR036788	T_IF-3_C_sf	Gene3D	151	242
IPR019814	Translation_initiation_fac_3_N	Pfam	74	140
IPR036787	T_IF-3_N_sf	SUPERFAMILY	71	141

No CAZYmes available for this sequence

External Links

No external refs found!