1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.3G420900.1

Sevir.3G420900.1


Description : LRR and NB-ARC domains-containing disease resistance protein


Gene families : OG_01_0000033 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000033_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G420900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G420900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_9


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006952 defense response ISM GOs from InterProScan
MF GO:0043531 ADP binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044974 Disease_R_plants PANTHER 880 957
IPR044974 Disease_R_plants PANTHER 3 868
IPR036388 WH-like_DNA-bd_sf Gene3D 402 499
IPR001611 Leu-rich_rpt Pfam 1298 1319
IPR027417 P-loop_NTPase SUPERFAMILY 169 416
IPR042197 Apaf_helical Gene3D 328 401
IPR032675 LRR_dom_sf Gene3D 884 1016
IPR032675 LRR_dom_sf Gene3D 1212 1329
IPR032675 LRR_dom_sf Gene3D 1017 1209
IPR044974 Disease_R_plants PANTHER 1153 1205
IPR044974 Disease_R_plants PANTHER 970 1147
IPR044974 Disease_R_plants PANTHER 1218 1269
IPR041118 Rx_N Pfam 14 98
IPR002182 NB-ARC Pfam 171 403
IPR027417 P-loop_NTPase Gene3D 152 314
IPR032675 LRR_dom_sf Gene3D 537 875

No CAZYmes available for this sequence

No external refs found!