Sevir.4G003600.1

Description : Cupredoxin superfamily protein

Gene families : OG_01_0001886 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001886_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G003600.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G003600.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_71
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_109

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001117	Cu-oxidase_2nd	Pfam	157	309
IPR008972	Cupredoxin	Gene3D	359	559
IPR034273	CuRO_1_AAO-like	CDD	24	141
IPR045087	Cu-oxidase_fam	PANTHER	11	562
IPR008972	Cupredoxin	SUPERFAMILY	151	347
IPR008972	Cupredoxin	Gene3D	24	145
IPR011707	Cu-oxidase-like_N	Pfam	30	143
IPR008972	Cupredoxin	SUPERFAMILY	19	170
IPR011706	Cu-oxidase_C	Pfam	423	529
IPR008972	Cupredoxin	Gene3D	154	346
IPR008972	Cupredoxin	SUPERFAMILY	375	548

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA1	358	591	1.9e-72	40	510

External Links

No external refs found!