Sevir.4G013100.1

Description : gametophytic factor 2

Gene families : OG_01_0004480 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004480_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G013100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G013100.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_59

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	ISM	GOs from InterProScan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0031072	heat shock protein binding	ISM	GOs from InterProScan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051082	unfolded protein binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001305	HSP_DnaJ_Cys-rich_dom	Pfam	227	287
IPR002939	DnaJ_C	Pfam	200	412
IPR036869	J_dom_sf	Gene3D	73	199
IPR001623	DnaJ_domain	PRINTS	96	111
IPR001623	DnaJ_domain	PRINTS	78	96
IPR001623	DnaJ_domain	PRINTS	133	152
IPR001623	DnaJ_domain	PRINTS	113	133
IPR008971	HSP40/DnaJ_pept-bd	SUPERFAMILY	274	340
IPR036869	J_dom_sf	SUPERFAMILY	73	179
IPR001623	DnaJ_domain	ProSiteProfiles	76	141
IPR012724	DnaJ	Hamap	73	438
IPR008971	HSP40/DnaJ_pept-bd	SUPERFAMILY	337	423
IPR001623	DnaJ_domain	SMART	75	133
IPR001305	HSP_DnaJ_Cys-rich_dom	CDD	227	287
IPR036410	HSP_DnaJ_Cys-rich_dom_sf	SUPERFAMILY	214	289
IPR018253	DnaJ_domain_CS	ProSitePatterns	118	137
IPR001305	HSP_DnaJ_Cys-rich_dom	ProSiteProfiles	214	292
IPR001623	DnaJ_domain	CDD	76	130
IPR001623	DnaJ_domain	Pfam	76	138

No CAZYmes available for this sequence

External Links

No external refs found!