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  5. Sevir.4G017900.1

Sevir.4G017900.1


Description : XB3 ortholog 3 in Arabidopsis thaliana


Gene families : OG_01_0005260 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005260_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G017900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G017900.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 15 248
IPR002110 Ankyrin_rpt SMART 150 179
IPR002110 Ankyrin_rpt SMART 44 73
IPR002110 Ankyrin_rpt SMART 194 223
IPR002110 Ankyrin_rpt SMART 77 106
IPR002110 Ankyrin_rpt SMART 111 140
IPR001841 Znf_RING ProSiteProfiles 299 348
IPR002110 Ankyrin_rpt ProSiteProfiles 111 136
IPR017907 Znf_RING_CS ProSitePatterns 314 323
IPR036770 Ankyrin_rpt-contain_sf Gene3D 10 112
IPR002110 Ankyrin_rpt Pfam 14 75
IPR002110 Ankyrin_rpt Pfam 82 179
IPR002110 Ankyrin_rpt ProSiteProfiles 44 76
IPR002110 Ankyrin_rpt ProSiteProfiles 150 182
IPR002110 Ankyrin_rpt ProSiteProfiles 77 109
IPR002110 Ankyrin_rpt ProSiteProfiles 194 226
IPR013083 Znf_RING/FYVE/PHD Gene3D 287 365
IPR036770 Ankyrin_rpt-contain_sf Gene3D 113 252
IPR002110 Ankyrin_rpt Pfam 195 226
IPR002110 Ankyrin_rpt PRINTS 210 224
IPR002110 Ankyrin_rpt PRINTS 151 166

No CAZYmes available for this sequence

No external refs found!