Sevir.1G127100.1

Description : RNAse l inhibitor protein 2

Gene families : OG_01_0008126 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008126_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G127100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G127100.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017896	4Fe4S_Fe-S-bd	ProSiteProfiles	46	75
IPR017871	ABC_transporter-like_CS	ProSitePatterns	467	481
IPR017900	4Fe4S_Fe_S_CS	ProSitePatterns	55	66
IPR003439	ABC_transporter-like_ATP-bd	ProSiteProfiles	341	567
IPR007209	RNaseL-inhib-like_metal-bd_dom	Pfam	7	36
IPR027417	P-loop_NTPase	SUPERFAMILY	368	541
IPR003439	ABC_transporter-like_ATP-bd	Pfam	102	244
IPR013283	RLI1	PANTHER	1	604
IPR003439	ABC_transporter-like_ATP-bd	ProSiteProfiles	70	321
IPR017896	4Fe4S_Fe-S-bd	Pfam	50	71
IPR034348	RLI_dom_1	CDD	78	332
IPR013283	RLI1	PRINTS	24	39
IPR013283	RLI1	PRINTS	52	76
IPR013283	RLI1	PRINTS	140	156
IPR013283	RLI1	PRINTS	79	99
IPR013283	RLI1	PRINTS	156	182
IPR013283	RLI1	PRINTS	107	132
IPR003439	ABC_transporter-like_ATP-bd	Pfam	366	495
IPR027417	P-loop_NTPase	SUPERFAMILY	94	289
IPR027417	P-loop_NTPase	Gene3D	333	602
IPR027417	P-loop_NTPase	Gene3D	2	332
IPR003593	AAA+_ATPase	SMART	102	294
IPR003593	AAA+_ATPase	SMART	372	545

No CAZYmes available for this sequence

External Links

No external refs found!