Sevir.4G025900.1

Description : ribosome-binding factor A family protein

Gene families : OG_01_0004219 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004219_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G025900.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G025900.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_153
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_130

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	ISM	GOs from InterProScan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000238	RbfA	Hamap	43	161
IPR000238	RbfA	Pfam	44	161
IPR023799	RbfA_dom_sf	SUPERFAMILY	39	164
IPR020053	Ribosome-bd_factorA_CS	ProSitePatterns	127	148
IPR015946	KH_dom-like_a/b	Gene3D	39	155
IPR000238	RbfA	PANTHER	29	207
IPR000238	RbfA	TIGRFAM	39	166

No CAZYmes available for this sequence

External Links

No external refs found!