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  5. ChrSy.fgenesh.mRNA.37

ChrSy.fgenesh.mRNA.37


Description : chloride channel C


Gene families : OG_01_0001544 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001544_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): ChrSy.fgenesh.mRNA.37
Neighborhood Oryza sativa coexpression network - Wang et al (2014): ChrSy.fgenesh.mRNA.37
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_29


Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISM GOs from InterProScan
BP GO:0006821 chloride transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001807 Cl-channel_volt-gated Pfam 173 586
IPR014743 Cl-channel_core SUPERFAMILY 93 607
IPR001807 Cl-channel_volt-gated PRINTS 184 201
IPR001807 Cl-channel_volt-gated PRINTS 215 234
IPR001807 Cl-channel_volt-gated PRINTS 554 573
IPR001807 Cl-channel_volt-gated PRINTS 592 606
IPR001807 Cl-channel_volt-gated PRINTS 504 524
IPR001807 Cl-channel_volt-gated PRINTS 279 298
IPR001807 Cl-channel_volt-gated PRINTS 536 552
IPR002251 Cl_channel_pln PRINTS 332 339
IPR002251 Cl_channel_pln PRINTS 300 308
IPR002251 Cl_channel_pln PRINTS 89 97
IPR002251 Cl_channel_pln PRINTS 456 472
IPR002251 Cl_channel_pln PRINTS 314 324
IPR000644 CBS_dom SMART 737 793
IPR000644 CBS_dom SMART 625 678

No CAZYmes available for this sequence

No external refs found!