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  5. ChrSy.fgenesh.mRNA.49

ChrSy.fgenesh.mRNA.49


Description : urease


Gene families : OG_01_0003998 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003998_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): ChrSy.fgenesh.mRNA.49
Neighborhood Oryza sativa coexpression network - Wang et al (2014): ChrSy.fgenesh.mRNA.49
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_275
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_453


Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process ISM GOs from InterProScan
MF GO:0009039 urease activity ISM GOs from InterProScan
MF GO:0016151 nickel cation binding ISM GOs from InterProScan
MF GO:0016787 hydrolase activity ISM GOs from InterProScan
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds ISM GOs from InterProScan
CC GO:0035550 urease complex ISM GOs from InterProScan
BP GO:0043419 urea catabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005848 Urease_asu TIGRFAM 353 803
IPR005848 Urease_asu PRINTS 688 704
IPR005848 Urease_asu PRINTS 649 666
IPR002019 Urease_beta-like TIGRFAM 233 315
IPR036463 Urease_gamma_sf Gene3D 130 219
IPR006680 Amidohydro-rel Pfam 479 801
IPR017950 Urease_AS ProSitePatterns 671 687
IPR011612 Urease_alpha_N_dom Pfam 352 473
IPR029754 Urease_Ni-bd ProSitePatterns 481 494
IPR017951 Urease_asu_c ProSiteProfiles 483 973
IPR002026 Urease_gamma/gamma-beta_su Pfam 134 215
IPR002026 Urease_gamma/gamma-beta_su CDD 138 215
IPR011059 Metal-dep_hydrolase_composite SUPERFAMILY 830 885
IPR036461 Urease_betasu_sf Gene3D 233 350
IPR002019 Urease_beta-like Pfam 233 312
IPR011059 Metal-dep_hydrolase_composite Gene3D 351 886
IPR005848 Urease_asu Hamap 351 973
IPR040881 Urease_linker Pfam 314 345
IPR036461 Urease_betasu_sf SUPERFAMILY 233 343
IPR036463 Urease_gamma_sf SUPERFAMILY 134 215
IPR005848 Urease_asu CDD 353 972
IPR002019 Urease_beta-like CDD 233 314
IPR011059 Metal-dep_hydrolase_composite SUPERFAMILY 352 531
IPR032466 Metal_Hydrolase SUPERFAMILY 484 973

No CAZYmes available for this sequence

No external refs found!