ChrSy.fgenesh.mRNA.52

No description available

Gene families : OG_01_0025743 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025743_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): ChrSy.fgenesh.mRNA.52
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): ChrSy.fgenesh.mRNA.52	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_181

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005162	Retrotrans_gag_dom	Pfam	689	730
IPR005162	Retrotrans_gag_dom	Pfam	82	171
IPR036875	Znf_CCHC_sf	SUPERFAMILY	804	841
IPR001878	Znf_CCHC	SMART	820	836
IPR001878	Znf_CCHC	ProSiteProfiles	821	836
IPR001878	Znf_CCHC	Pfam	820	836

No CAZYmes available for this sequence

External Links

No external refs found!