ChrUn.fgenesh.mRNA.23

Description : MuDR family transposase

Gene families : OG_01_0000907 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000907_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): ChrUn.fgenesh.mRNA.23
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_239

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015401	Transposase_MuDR_N	Pfam	1	57
IPR007527	Znf_SWIM	ProSiteProfiles	726	764
IPR004332	Transposase_MuDR	Pfam	227	273
IPR006564	Znf_PMZ	SMART	739	766
IPR018289	MULE_transposase_dom	Pfam	416	519

No CAZYmes available for this sequence

External Links

No external refs found!