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  5. LOC_Os01g02050.1

LOC_Os01g02050.1


Description : phosphoenolpyruvate carboxylase 4


Gene families : OG_01_0023016 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0023016_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g02050.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g02050.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_240
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_87


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
BP GO:0006099 tricarboxylic acid cycle ISM GOs from InterProScan
MF GO:0008964 phosphoenolpyruvate carboxylase activity ISM GOs from InterProScan
BP GO:0015977 carbon fixation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015813 Pyrv/PenolPyrv_Kinase-like_dom SUPERFAMILY 19 1035
IPR022805 PEP_COase_bac/pln-type Hamap 1 1035
IPR021135 PEP_COase Pfam 18 334
IPR021135 PEP_COase Pfam 439 1035
IPR033129 PEPCASE_His_AS ProSitePatterns 692 704
IPR021135 PEP_COase PANTHER 8 1035
IPR018129 PEP_COase_Lys_AS ProSitePatterns 150 161
IPR021135 PEP_COase PRINTS 149 162
IPR021135 PEP_COase PRINTS 202 218
IPR021135 PEP_COase PRINTS 261 276

No CAZYmes available for this sequence

No external refs found!