LOC_Os01g03100.1

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0011551 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011551_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g03100.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g03100.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_118

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR022143	DUF3675	Pfam	106	221
IPR011016	Znf_RING-CH	SMART	54	101
IPR033275	MARCH-like	PANTHER	1	259
IPR013083	Znf_RING/FYVE/PHD	Gene3D	43	110
IPR011016	Znf_RING-CH	ProSiteProfiles	47	107
IPR011016	Znf_RING-CH	Pfam	55	100

No CAZYmes available for this sequence

External Links

No external refs found!