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  5. LOC_Os01g03429.1

LOC_Os01g03429.1


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG_01_0018769 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018769_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g03429.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g03429.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_408
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_264


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
BP GO:0007275 multicellular organism development ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 61 120
IPR013010 Znf_SIAH ProSiteProfiles 66 125
IPR018121 7-in-absentia-prot_TRAF-dom Pfam 56 124

No CAZYmes available for this sequence

No external refs found!