LOC_Os01g03620.1

Description : Cupredoxin superfamily protein

Gene families : OG_01_0004586 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004586_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g03620.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g03620.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_200

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001117	Cu-oxidase_2nd	Pfam	282	357
IPR008972	Cupredoxin	Gene3D	415	575
IPR008972	Cupredoxin	SUPERFAMILY	231	357
IPR008972	Cupredoxin	SUPERFAMILY	412	573
IPR045087	Cu-oxidase_fam	PANTHER	7	579
IPR008972	Cupredoxin	Gene3D	45	223
IPR011706	Cu-oxidase_C	Pfam	445	574
IPR008972	Cupredoxin	Gene3D	227	407
IPR011707	Cu-oxidase-like_N	Pfam	150	227
IPR008972	Cupredoxin	SUPERFAMILY	50	227

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA1	358	596	4.9e-16	105	541

External Links

No external refs found!