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  5. LOC_Os01g05430.1

LOC_Os01g05430.1


Description : RHOMBOID-like 1


Gene families : OG_01_0000445 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000445_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g05430.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g05430.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_100
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_38


Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR022764 Peptidase_S54_rhomboid_dom Pfam 4 79
IPR002610 Peptidase_S54_rhomboid-like PANTHER 1 203
IPR035952 Rhomboid-like_sf Gene3D 1 80
IPR035952 Rhomboid-like_sf SUPERFAMILY 5 81

No CAZYmes available for this sequence

No external refs found!