LOC_Os01g07070.2

Description : TBP-associated factor 15B

Gene families : OG_01_0002995 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002995_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g07070.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g07070.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_131

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001876	Znf_RanBP2	Pfam	88	118
IPR000504	RRM_dom	ProSiteProfiles	362	453
IPR001876	Znf_RanBP2	ProSitePatterns	92	113
IPR035979	RBD_domain_sf	SUPERFAMILY	360	484
IPR000504	RRM_dom	Pfam	364	393
IPR000504	RRM_dom	SMART	363	449
IPR001876	Znf_RanBP2	ProSiteProfiles	88	119
IPR036443	Znf_RanBP2_sf	SUPERFAMILY	81	119
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	345	495
IPR001876	Znf_RanBP2	SMART	90	116

No CAZYmes available for this sequence

External Links

No external refs found!