LOC_Os01g08400.1

Description : syntaxin of plants 32

Gene families : OG_01_0002600 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002600_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g08400.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g08400.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_58

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005484	SNAP receptor activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR021538	Syntaxin-5_N	Pfam	6	26
IPR045242	Syntaxin	PANTHER	8	343
IPR000727	T_SNARE_dom	SMART	247	314
IPR010989	SNARE	SUPERFAMILY	59	307
IPR000727	T_SNARE_dom	Pfam	289	340
IPR006012	Syntaxin/epimorphin_CS	ProSitePatterns	258	297
IPR000727	T_SNARE_dom	ProSiteProfiles	252	314

No CAZYmes available for this sequence

External Links

No external refs found!