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  5. LOC_Os01g08770.1

LOC_Os01g08770.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0002214 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002214_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g08770.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g08770.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_214


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012952 BING4_C_dom Pfam 356 434
IPR040315 WDR46/Utp7 PANTHER 16 531
IPR012952 BING4_C_dom SMART 355 435
IPR001680 WD40_rpt SMART 270 309
IPR001680 WD40_rpt SMART 148 185
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 120 383
IPR001680 WD40_rpt ProSiteProfiles 277 318
IPR019775 WD40_repeat_CS ProSitePatterns 296 310
IPR001680 WD40_rpt Pfam 274 309
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 119 389

No CAZYmes available for this sequence

No external refs found!