1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g09252.1

LOC_Os01g09252.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0007150 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007150_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g09252.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g09252.1 No neighbors in network
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_211


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020472 G-protein_beta_WD-40_rep PRINTS 137 151
IPR020472 G-protein_beta_WD-40_rep PRINTS 97 111
IPR020472 G-protein_beta_WD-40_rep PRINTS 53 67
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 5 250
IPR019775 WD40_repeat_CS ProSitePatterns 97 111
IPR001680 WD40_rpt ProSiteProfiles 80 119
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 11 247
IPR001680 WD40_rpt SMART 73 110
IPR001680 WD40_rpt SMART 113 150
IPR001680 WD40_rpt SMART 201 238
IPR001680 WD40_rpt SMART 29 66
IPR001680 WD40_rpt Pfam 76 110
IPR001680 WD40_rpt Pfam 115 149

No CAZYmes available for this sequence

No external refs found!