LOC_Os01g09640.1

Description : myb-like transcription factor family protein

Gene families : OG_01_0000825 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000825_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g09640.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g09640.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006447	Myb_dom_plants	TIGRFAM	121	173
IPR001005	SANT/Myb	SMART	122	172
IPR017930	Myb_dom	ProSiteProfiles	118	174
IPR001005	SANT/Myb	ProSiteProfiles	118	170
IPR017930	Myb_dom	Pfam	125	169
IPR009057	Homeobox-like_sf	SUPERFAMILY	119	175
IPR017884	SANT_dom	ProSiteProfiles	126	174
IPR001878	Znf_CCHC	ProSiteProfiles	3	18
IPR001005	SANT/Myb	CDD	125	170

No CAZYmes available for this sequence

External Links

No external refs found!