1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g11580.1

LOC_Os01g11580.1


Description : global transcription factor group E4


Gene families : OG_01_0012249 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012249_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g11580.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g11580.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_332
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_196


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR038336 NET_sf Gene3D 153 233
IPR027353 NET_dom Pfam 159 221
IPR001487 Bromodomain PRINTS 54 73
IPR001487 Bromodomain PRINTS 36 54
IPR001487 Bromodomain PRINTS 4 17
IPR001487 Bromodomain PRINTS 20 36
IPR027353 NET_dom ProSiteProfiles 150 231
IPR001487 Bromodomain ProSiteProfiles 1 73
IPR037377 GTE_bromo CDD 1 87
IPR036427 Bromodomain-like_sf SUPERFAMILY 1 94
IPR001487 Bromodomain SMART 1 92
IPR001487 Bromodomain Pfam 1 77
IPR036427 Bromodomain-like_sf Gene3D 1 101

No CAZYmes available for this sequence

No external refs found!