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  5. LOC_Os01g11952.1

LOC_Os01g11952.1


Description : SET domain protein 16


Gene families : OG_01_0003735 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003735_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g11952.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g11952.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_266
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_129


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 556 613
IPR001214 SET_dom ProSiteProfiles 849 966
IPR034732 EPHD ProSiteProfiles 615 730
IPR019787 Znf_PHD-finger ProSiteProfiles 376 431
IPR013083 Znf_RING/FYVE/PHD Gene3D 369 435
IPR003616 Post-SET_dom ProSiteProfiles 975 991
IPR019787 Znf_PHD-finger ProSiteProfiles 561 612
IPR011011 Znf_FYVE_PHD SUPERFAMILY 562 626
IPR013083 Znf_RING/FYVE/PHD Gene3D 614 732
IPR011011 Znf_FYVE_PHD SUPERFAMILY 375 433
IPR000313 PWWP_dom ProSiteProfiles 192 261
IPR042011 ATX3/4/5_PHD CDD 563 609
IPR025780 Hist-Lys_N-MeTrfase_ATX ProSiteProfiles 1 991
IPR001965 Znf_PHD SMART 378 429
IPR001965 Znf_PHD SMART 674 730
IPR001965 Znf_PHD SMART 563 610
IPR001214 SET_dom SMART 849 972
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 564 609
IPR000313 PWWP_dom Pfam 193 286
IPR001214 SET_dom Pfam 860 965

No CAZYmes available for this sequence

No external refs found!