LOC_Os01g13100.1

Description : Predicted eukaryotic LigT

Gene families : OG_01_0001354 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001354_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g13100.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g13100.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_308
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_231

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	143	215
IPR009097	Cyclic_Pdiesterase	SUPERFAMILY	308	479
IPR036612	KH_dom_type_1_sf	Gene3D	132	211
IPR004087	KH_dom	SMART	139	207
IPR004088	KH_dom_type_1	Pfam	144	203
IPR019510	AKAP7-like_phosphoesterase	Pfam	217	479
IPR009210	ASCC1	PANTHER	62	480

No CAZYmes available for this sequence

External Links

No external refs found!