LOC_Os01g14840.1

Description : RING/U-box superfamily protein

Gene families : OG_01_0190481 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): No tree available for this family

Sequence : cds (download), rna (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g14840.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g14840.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_52
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_9

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
BP	GO:0006414	translational elongation	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032790	ribosome disassembly	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072344	rescue of stalled ribosome	ISM	GOs from InterProScan
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903008	organelle disassembly	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044288	ZNF598/Hel2	PANTHER	63	354
IPR044288	ZNF598/Hel2	PANTHER	354	737
IPR013087	Znf_C2H2_type	SMART	319	348
IPR013087	Znf_C2H2_type	SMART	288	318
IPR013087	Znf_C2H2_type	SMART	264	287
IPR041888	RING-HC_ZNF598/Hel2	CDD	67	107

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os01g14840.1

Expression Profile

Co-expression Networks

Functional Annotation