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  5. LOC_Os01g15350.1

LOC_Os01g15350.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0008757 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008757_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g15350.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g15350.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_154
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_131


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 51 79
IPR000571 Znf_CCCH Pfam 347 372
IPR000571 Znf_CCCH Pfam 103 128
IPR000571 Znf_CCCH Pfam 53 78
IPR000571 Znf_CCCH Pfam 147 172
IPR000571 Znf_CCCH Pfam 301 326
IPR036855 Znf_CCCH_sf SUPERFAMILY 55 80
IPR036855 Znf_CCCH_sf SUPERFAMILY 347 375
IPR036855 Znf_CCCH_sf SUPERFAMILY 303 326
IPR000571 Znf_CCCH ProSiteProfiles 345 373
IPR036855 Znf_CCCH_sf SUPERFAMILY 148 171
IPR036855 Znf_CCCH_sf SUPERFAMILY 104 129
IPR000571 Znf_CCCH ProSiteProfiles 145 173
IPR000571 Znf_CCCH ProSiteProfiles 101 129
IPR000571 Znf_CCCH SMART 101 128
IPR000571 Znf_CCCH SMART 51 78
IPR000571 Znf_CCCH SMART 345 372
IPR000571 Znf_CCCH SMART 299 326
IPR000571 Znf_CCCH SMART 145 172
IPR000571 Znf_CCCH ProSiteProfiles 299 327

No CAZYmes available for this sequence

No external refs found!