LOC_Os01g17330.2

Description : Translation initiation factor IF6

Gene families : OG_01_0006860 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006860_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g17330.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g17330.2	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0042255	ribosome assembly	None	Extended
BP	GO:0042256	cytosolic ribosome assembly	ISM	GOs from InterProScan
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	ISM	GOs from InterProScan
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002769	eIF6	Pfam	15	212
IPR002769	eIF6	PIRSF	10	235
IPR002769	eIF6	Hamap	1	255
IPR002769	eIF6	TIGRFAM	14	233
IPR002769	eIF6	PANTHER	14	253
IPR002769	eIF6	CDD	16	231
IPR002769	eIF6	SMART	12	213

No CAZYmes available for this sequence

External Links

No external refs found!