LOC_Os01g18870.1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG_01_0041908 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0041908_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g18870.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g18870.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_125

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
BP	GO:0048658	anther wall tapetum development	ISM	GOs from InterProScan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045895	bHLH91-like	PANTHER	1	379
IPR036638	HLH_DNA-bd_sf	SUPERFAMILY	182	243
IPR011598	bHLH_dom	Pfam	181	222
IPR011598	bHLH_dom	SMART	179	228
IPR011598	bHLH_dom	ProSiteProfiles	173	222
IPR036638	HLH_DNA-bd_sf	Gene3D	179	231
IPR045896	MYC1-like_bHLH	CDD	178	247

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os01g18870.1

Expression Profile

Co-expression Networks

Functional Annotation