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  5. LOC_Os01g19850.1

LOC_Os01g19850.1


Description : cation-chloride co-transporter 1


Gene families : OG_01_0002524 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002524_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g19850.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g19850.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_187


Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport ISM GOs from InterProScan
MF GO:0015377 chloride:monoatomic cation symporter activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004842 SLC12A_fam PANTHER 379 795
IPR004842 SLC12A_fam PANTHER 56 379
IPR004841 AA-permease/SLC12A_dom Pfam 70 404
IPR018491 SLC12_C Pfam 463 584
IPR018491 SLC12_C Pfam 595 795

No CAZYmes available for this sequence

No external refs found!