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  5. LOC_Os01g24940.1

LOC_Os01g24940.1


Description : poly(ADP-ribose) polymerase


Gene families : OG_01_0000715 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000715_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g24940.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g24940.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_199
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_145


Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity ISM GOs from InterProScan
BP GO:0006471 obsolete protein ADP-ribosylation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036930 WGR_dom_sf SUPERFAMILY 155 286
IPR012317 Poly(ADP-ribose)pol_cat_dom Pfam 454 655
IPR003034 SAP_dom SMART 2 36
IPR003034 SAP_dom SMART 91 125
IPR003034 SAP_dom ProSiteProfiles 2 36
IPR008893 WGR_domain Pfam 195 274
IPR003034 SAP_dom ProSiteProfiles 91 125
IPR012317 Poly(ADP-ribose)pol_cat_dom ProSiteProfiles 434 660
IPR008893 WGR_domain SMART 195 275
IPR036361 SAP_dom_sf Gene3D 71 134
IPR036361 SAP_dom_sf Gene3D 2 51
IPR036616 Poly(ADP-ribose)pol_reg_dom_sf SUPERFAMILY 309 442
IPR036616 Poly(ADP-ribose)pol_reg_dom_sf Gene3D 292 443
IPR004102 Poly(ADP-ribose)pol_reg_dom Pfam 310 440
IPR036361 SAP_dom_sf SUPERFAMILY 4 39
IPR003034 SAP_dom Pfam 91 122
IPR003034 SAP_dom Pfam 5 34
IPR004102 Poly(ADP-ribose)pol_reg_dom ProSiteProfiles 308 426

No CAZYmes available for this sequence

No external refs found!