LOC_Os01g25450.1

Description : translocon at the outer envelope membrane of chloroplasts 159

Gene families : OG_01_0278663 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): No tree available for this family

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os01g25450.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os01g25450.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_117
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_250

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006703	G_AIG1	ProSiteProfiles	4911	5127
IPR045058	GIMA/IAN/Toc	PANTHER	685	752
IPR045058	GIMA/IAN/Toc	PANTHER	3028	3169
IPR045058	GIMA/IAN/Toc	PANTHER	4165	4576
IPR045058	GIMA/IAN/Toc	PANTHER	2477	2678
IPR045058	GIMA/IAN/Toc	PANTHER	1376	1682
IPR045058	GIMA/IAN/Toc	PANTHER	3165	3491
IPR045058	GIMA/IAN/Toc	PANTHER	1992	2178
IPR006703	G_AIG1	Pfam	4914	5084
IPR045058	GIMA/IAN/Toc	PANTHER	745	1068
IPR045058	GIMA/IAN/Toc	PANTHER	2670	2978
IPR027417	P-loop_NTPase	Gene3D	4886	5146
IPR045058	GIMA/IAN/Toc	PANTHER	3979	4034
IPR045058	GIMA/IAN/Toc	PANTHER	2180	2500
IPR027417	P-loop_NTPase	SUPERFAMILY	4902	5067
IPR045058	GIMA/IAN/Toc	PANTHER	4016	4174
IPR045058	GIMA/IAN/Toc	PANTHER	1674	2001
IPR024283	TOC159_MAD	Pfam	5375	5427
IPR024283	TOC159_MAD	Pfam	5219	5376
IPR045058	GIMA/IAN/Toc	PANTHER	1061	1373
IPR045058	GIMA/IAN/Toc	PANTHER	3486	3788
IPR045058	GIMA/IAN/Toc	PANTHER	3821	3981
IPR045058	GIMA/IAN/Toc	PANTHER	447	689

No CAZYmes available for this sequence

External Links

No external refs found!